Sequence Similarity Clusters for the Entities in PDB 1O6E

Entity #1 | Chains: A,B
CAPSID PROTEIN P40 protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46264
95 % 1 1 38491 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 36695
70 % 1 1 32517
50 % 1 1 27640
40 % 2 3 9197
30 % 8 24 1150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures