Sequence Similarity Clusters for the Entities in PDB 1O5W

Entity #1 | Chains: A,B,C,D
Amine oxidase [flavin-containing] A protein, length: 534 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17205
95 % 1 1 15839 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 1 1 15549
70 % 43 45 488
50 % 43 45 536
40 % 43 45 574
30 % 43 45 570

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures