Sequence Similarity Clusters for the Entities in PDB 1O5M

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 7931
95 % 14 42 399 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 25 56 367
70 % 25 56 404
50 % 25 56 478
40 % 25 56 512
30 % 25 56 511
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 41 908
95 % 25 56 873 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 25 56 908
70 % 25 56 940
50 % 25 56 984
40 % 25 56 1001
30 % 25 56 979

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.