Sequence Similarity Clusters for the Entities in PDB 1O5F

Entity #1 | Chains: L
Serine protease hepsin protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29452
95 % 3 3 24446 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 3 23643
70 % 3 3 21504
50 % 3 3 18612
40 % 3 3 16578
30 % 3 3 14186
Entity #2 | Chains: H
Serine protease hepsin protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27231
95 % 3 3 22768 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 3 3 22101
70 % 3 3 20271
50 % 3 3 17557
40 % 774 1698 4
30 % 818 1848 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures