Sequence Similarity Clusters for the Entities in PDB 1O5F

Entity #1 | Chains: L
Serine protease hepsin protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26663
95 % 3 3 23484 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 3 22713
70 % 3 3 20696
50 % 3 3 17812
40 % 3 3 15761
30 % 3 3 13212
Entity #2 | Chains: H
Serine protease hepsin protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26839
95 % 3 3 23625 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 3 3 22852
70 % 3 3 20814
50 % 3 3 17910
40 % 842 1884 4
30 % 846 1898 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures