Sequence Similarity Clusters for the Entities in PDB 1O5E

Entity #1 | Chains: L
Serine protease hepsin protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29730
95 % 2 3 24655 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 3 23842
70 % 2 3 21678
50 % 2 3 18765
40 % 2 3 16710
30 % 2 3 14302
Entity #2 | Chains: H
Serine protease hepsin protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27512
95 % 2 3 22981 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 3 22301
70 % 2 3 20449
50 % 2 3 17714
40 % 743 1719 4
30 % 782 1869 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures