Sequence Similarity Clusters for the Entities in PDB 1O5E

Entity #1 | Chains: L
Serine protease hepsin protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30322
95 % 2 3 25121 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 3 24277
70 % 2 3 22053
50 % 2 3 19063
40 % 2 3 16965
30 % 2 3 14514
Entity #2 | Chains: H
Serine protease hepsin protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28084
95 % 2 3 23433 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 3 22725
70 % 2 3 20821
50 % 2 3 18009
40 % 784 1863 4
30 % 789 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures