Sequence Similarity Clusters for the Entities in PDB 1O4Z

Entity #1 | Chains: A,B,C,D
beta-agarase B protein, length: 346 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18183
95 % 1 1 16696 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 16324
70 % 1 1 15210
50 % 1 1 13356
40 % 1 1 11631
30 % 1 1 9868

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures