Sequence Similarity Clusters for the Entities in PDB 1O4Z

Entity #1 | Chains: A,B,C,D
beta-agarase B protein, length: 346 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19434
95 % 1 1 17330 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 16987
70 % 1 1 15816
50 % 1 2 9025
40 % 1 2 8262
30 % 1 2 7284

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures