Sequence Similarity Clusters for the Entities in PDB 1O4Z

Entity #1 | Chains: A,B,C,D
beta-agarase B protein, length: 346 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19150
95 % 1 1 17097 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 16763
70 % 1 1 15620
50 % 1 2 8898
40 % 1 2 8155
30 % 1 2 7193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures