Sequence Similarity Clusters for the Entities in PDB 1O4Y

Entity #1 | Chains: A
beta-agarase A protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56237
95 % 1 2 28747 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 27748
70 % 1 2 25066
50 % 1 4 8716
40 % 1 4 7981
30 % 1 4 7049

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.