Sequence Similarity Clusters for the Entities in PDB 1O4J

Entity #1 | Chains: A
PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 36 920
95 % 15 55 661 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 15 55 688
70 % 16 63 616
50 % 17 79 514
40 % 28 134 223
30 % 40 228 156

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.