Sequence Similarity Clusters for the Entities in PDB 1O4D

Entity #1 | Chains: A
PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 36 933
95 % 23 55 666 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 23 55 693
70 % 24 63 623
50 % 26 79 518
40 % 48 134 226
30 % 65 231 151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.