Sequence Similarity Clusters for the Entities in PDB 1O2F

Entity #1 | Chains: A
PTS system, glucose-specific IIA component protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 3547
95 % 11 12 4336
90 % 11 12 4374
70 % 12 13 3297
50 % 12 13 3214
40 % 14 16 2735
30 % 14 16 2572
Entity #2 | Chains: B
PTS system, glucose-specific IIBC component protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72739
95 % 3 3 15542
90 % 3 3 15256
70 % 3 3 14282
50 % 3 3 12657
40 % 3 3 11460
30 % 3 3 9958

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures