Sequence Similarity Clusters for the Entities in PDB 1O1T

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 8553
95 % 11 42 495 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 22 56 418
70 % 22 56 458
50 % 22 56 515
40 % 22 56 562
30 % 22 56 566
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 41 1128
95 % 22 56 958 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 22 56 986
70 % 22 56 1020
50 % 22 56 1067
40 % 22 56 1075
30 % 22 56 1080

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures