Sequence Similarity Clusters for the Entities in PDB 1O1T

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 8165
95 % 11 42 425 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 22 56 377
70 % 22 56 412
50 % 22 56 495
40 % 22 56 533
30 % 22 56 531
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 41 941
95 % 22 56 892 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 22 56 929
70 % 22 56 963
50 % 22 56 1012
40 % 22 56 1032
30 % 22 56 1011

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.