Sequence Similarity Clusters for the Entities in PDB 1O1S

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 8006
95 % 19 42 416 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 31 56 367
70 % 31 56 402
50 % 31 56 479
40 % 31 56 516
30 % 31 56 515
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 41 918
95 % 32 56 876 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 32 56 910
70 % 32 56 942
50 % 32 56 992
40 % 32 56 1012
30 % 32 56 990

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.