Sequence Similarity Clusters for the Entities in PDB 1O1R

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 8093
95 % 15 42 420 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 26 56 374
70 % 26 56 409
50 % 26 56 488
40 % 26 56 526
30 % 26 56 526
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 41 926
95 % 27 56 885 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 27 56 920
70 % 27 56 956
50 % 27 56 1003
40 % 27 56 1023
30 % 27 56 999

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.