Sequence Similarity Clusters for the Entities in PDB 1O1O

Entity #1 | Chains: A,C
Hemoglobin Alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44774
95 % 46 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 47 246 21
70 % 58 327 15
50 % 143 744 4
40 % 144 749 8
30 % 416 1200 8
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44435
95 % 47 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 48 250 19
70 % 61 341 13
50 % 144 744 4
40 % 145 749 8
30 % 417 1200 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.