Sequence Similarity Clusters for the Entities in PDB 1O1N

Entity #1 | Chains: A
Hemoglobin Alpha chain protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57592
95 % 5 9 7952 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 5 9 7887
70 % 5 9 7611
50 % 5 9 7001
40 % 5 9 6467
30 % 5 9 5788
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 214 29
95 % 62 250 19 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 63 255 20
70 % 77 346 11
50 % 172 754 4
40 % 173 759 7
30 % 480 1281 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures