Sequence Similarity Clusters for the Entities in PDB 1O1M

Entity #1 | Chains: A
Hemoglobin Alpha chain protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58131
95 % 7 9 8174 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 7 9 8102
70 % 7 9 7803
50 % 7 9 7173
40 % 7 9 6629
30 % 7 9 5919
Entity #2 | Chains: B,D
Hemoglobin Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 75 214 42
95 % 81 250 20 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 83 255 21
70 % 103 346 14
50 % 224 754 4
40 % 225 759 7
30 % 603 1293 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures