Sequence Similarity Clusters for the Entities in PDB 1O1M

Entity #1 | Chains: A
Hemoglobin Alpha chain protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55588
95 % 7 9 7517 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 7 9 7472
70 % 7 9 7250
50 % 7 9 6683
40 % 7 9 6218
30 % 7 9 5569
Entity #2 | Chains: B,D
Hemoglobin Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22211
95 % 78 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 80 245 32
70 % 100 336 13
50 % 218 734 5
40 % 219 739 9
30 % 561 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.