Sequence Similarity Clusters for the Entities in PDB 1O1L

Entity #1 | Chains: A
Hemoglobin Alpha chain protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37125
95 % 6 9 8185 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 6 9 8113
70 % 6 9 7817
50 % 6 9 7184
40 % 6 9 6638
30 % 6 9 5927
Entity #2 | Chains: B,D
Hemoglobin Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 71 214 43
95 % 77 250 20 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 79 255 21
70 % 96 346 14
50 % 211 754 4
40 % 212 759 7
30 % 574 1294 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures