Sequence Similarity Clusters for the Entities in PDB 1O1L

Entity #1 | Chains: A
Hemoglobin Alpha chain protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57092
95 % 6 9 7730 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 6 9 7676
70 % 6 9 7468
50 % 6 9 6880
40 % 6 9 6394
30 % 6 9 5718
Entity #2 | Chains: B,D
Hemoglobin Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 50 164 51
95 % 74 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 76 250 19
70 % 94 341 13
50 % 207 744 4
40 % 208 749 8
30 % 543 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures