Sequence Similarity Clusters for the Entities in PDB 1O1J

Entity #1 | Chains: A
Hemoglobin Alpha chain protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57557
95 % 4 9 7809 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 4 9 7755
70 % 4 9 7537
50 % 4 9 6944
40 % 4 9 6455
30 % 4 9 5771
Entity #2 | Chains: B,D
Hemoglobin Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29219
95 % 60 250 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 61 255 19
70 % 75 346 11
50 % 169 754 4
40 % 170 759 8
30 % 464 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures