Sequence Similarity Clusters for the Entities in PDB 1O1J

Entity #1 | Chains: A
Hemoglobin Alpha chain protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56379
95 % 4 9 7628 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 4 9 7581
70 % 4 9 7386
50 % 4 9 6796
40 % 4 9 6316
30 % 4 9 5652
Entity #2 | Chains: B,D
Hemoglobin Beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28594
95 % 57 244 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 58 249 19
70 % 73 340 13
50 % 165 742 4
40 % 166 747 7
30 % 452 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.