Sequence Similarity Clusters for the Entities in PDB 1O1G

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 616
95 % 6 15 801
90 % 6 15 831
70 % 10 19 769
50 % 41 50 457
40 % 89 101 296
30 % 121 133 220
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 11 673
95 % 5 14 842
90 % 5 14 876
70 % 7 16 860
50 % 37 47 528
40 % 314 349 43
30 % 341 376 51
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 663
95 % 6 15 831
90 % 6 15 865
70 % 15 25 629
50 % 15 25 677
40 % 315 349 43
30 % 342 376 51
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 128 137 8
95 % 188 197 9
90 % 193 202 10
70 % 198 207 13
50 % 205 214 15
40 % 224 233 23
30 % 244 253 38

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures