Sequence Similarity Clusters for the Entities in PDB 1O1G

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 601
95 % 6 15 780
90 % 6 15 809
70 % 10 19 761
50 % 41 50 450
40 % 89 101 289
30 % 114 126 239
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 11 654
95 % 5 14 814
90 % 5 14 850
70 % 7 16 844
50 % 37 47 512
40 % 306 341 41
30 % 333 368 53
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 640
95 % 6 15 806
90 % 6 15 839
70 % 15 25 616
50 % 15 25 661
40 % 307 341 41
30 % 334 368 53
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 124 21
95 % 172 181 14
90 % 177 186 14
70 % 182 191 20
50 % 185 194 25
40 % 204 213 36
30 % 224 233 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.