Sequence Similarity Clusters for the Entities in PDB 1O1G

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 714
95 % 6 15 837
90 % 6 15 866
70 % 10 19 798
50 % 79 91 361
40 % 99 111 276
30 % 123 135 234
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 11 763
95 % 5 14 864
90 % 5 14 896
70 % 7 16 881
50 % 37 47 539
40 % 326 361 40
30 % 393 432 43
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 742
95 % 6 15 853
90 % 6 15 886
70 % 15 25 653
50 % 15 25 701
40 % 327 361 40
30 % 394 432 43
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 141 150 8
95 % 196 205 9
90 % 202 211 9
70 % 207 216 11
50 % 214 223 15
40 % 233 242 24
30 % 253 262 38

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures