Sequence Similarity Clusters for the Entities in PDB 1O1F

Entity #1 | Chains: A,D,G,J
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 12 619
95 % 12 15 806
90 % 12 15 836
70 % 16 19 780
50 % 47 50 464
40 % 95 101 304
30 % 128 134 221
Entity #2 | Chains: B,E,H,K
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 11 680
95 % 11 14 848
90 % 11 14 883
70 % 13 16 869
50 % 43 47 532
40 % 335 358 41
30 % 362 385 50
Entity #3 | Chains: C,F,I,L
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 12 669
95 % 12 15 837
90 % 12 15 873
70 % 21 25 646
50 % 21 25 696
40 % 336 358 41
30 % 363 385 50
Entity #4 | Chains: 0,1,2,3,4,5,6,7,8,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 134 137 8
95 % 194 197 9
90 % 200 203 10
70 % 205 208 13
50 % 212 215 15
40 % 231 234 24
30 % 251 254 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures