Sequence Similarity Clusters for the Entities in PDB 1O1F

Entity #1 | Chains: A,D,G,J
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 12 592
95 % 12 15 771
90 % 12 15 797
70 % 16 19 744
50 % 47 50 441
40 % 95 101 280
30 % 120 126 234
Entity #2 | Chains: B,E,H,K
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 11 641
95 % 11 14 803
90 % 11 14 836
70 % 13 16 835
50 % 43 47 503
40 % 313 336 34
30 % 340 363 47
Entity #3 | Chains: C,F,I,L
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 12 628
95 % 12 15 796
90 % 12 15 826
70 % 21 25 598
50 % 21 25 639
40 % 314 336 34
30 % 341 363 47
Entity #4 | Chains: 0,1,2,3,4,5,6,7,8,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 120 123 22
95 % 175 178 15
90 % 180 183 15
70 % 184 187 23
50 % 187 190 37
40 % 206 209 39
30 % 226 229 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.