Sequence Similarity Clusters for the Entities in PDB 1O1E

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 595
95 % 5 15 772
90 % 5 15 799
70 % 9 19 747
50 % 40 50 444
40 % 88 101 281
30 % 113 126 237
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 642
95 % 4 14 805
90 % 4 14 839
70 % 6 16 835
50 % 36 47 507
40 % 299 336 36
30 % 326 363 47
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 631
95 % 5 15 798
90 % 5 15 829
70 % 14 25 609
50 % 14 25 652
40 % 300 336 36
30 % 327 363 47
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 113 123 22
95 % 169 179 15
90 % 174 184 15
70 % 178 188 23
50 % 181 191 37
40 % 200 210 39
30 % 220 230 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.