Sequence Similarity Clusters for the Entities in PDB 1O1E

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 531
95 % 5 15 702
90 % 5 15 733
70 % 7 17 728
50 % 38 48 429
40 % 88 101 265
30 % 113 126 222
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 582
95 % 4 14 747
90 % 4 14 780
70 % 5 15 802
50 % 34 44 501
40 % 293 329 31
30 % 319 356 44
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 571
95 % 5 15 729
90 % 5 15 759
70 % 14 25 551
50 % 14 25 597
40 % 294 329 31
30 % 320 356 44
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 113 123 20
95 % 164 174 13
90 % 169 179 14
70 % 172 182 23
50 % 174 184 36
40 % 193 203 36
30 % 213 223 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.