Sequence Similarity Clusters for the Entities in PDB 1O1E

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 600
95 % 5 15 778
90 % 5 15 806
70 % 9 19 762
50 % 40 50 450
40 % 88 101 289
30 % 113 126 239
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 653
95 % 4 14 812
90 % 4 14 848
70 % 6 16 843
50 % 36 47 512
40 % 303 340 42
30 % 330 367 51
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 640
95 % 5 15 805
90 % 5 15 838
70 % 14 25 617
50 % 14 25 662
40 % 304 340 42
30 % 331 367 51
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 113 123 23
95 % 170 180 15
90 % 175 185 15
70 % 180 190 23
50 % 183 193 35
40 % 202 212 40
30 % 222 232 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.