Sequence Similarity Clusters for the Entities in PDB 1O1D

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 12 601
95 % 9 15 780
90 % 9 15 809
70 % 13 19 761
50 % 44 50 450
40 % 92 101 289
30 % 117 126 239
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 654
95 % 8 14 814
90 % 8 14 850
70 % 10 16 844
50 % 40 47 512
40 % 312 341 41
30 % 339 368 53
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 12 640
95 % 9 15 806
90 % 9 15 839
70 % 18 25 616
50 % 18 25 661
40 % 313 341 41
30 % 340 368 53
Entity #4 | Chains: 0,1,2,3,4,5,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 124 21
95 % 175 181 14
90 % 180 186 14
70 % 185 191 20
50 % 188 194 25
40 % 207 213 36
30 % 227 233 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.