Sequence Similarity Clusters for the Entities in PDB 1O1C

Entity #1 | Chains: A,D,G,J,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 508
95 % 8 15 674
90 % 8 15 703
70 % 9 16 715
50 % 40 47 408
40 % 90 100 261
30 % 115 125 216
Entity #2 | Chains: B,E,H,K,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 568
95 % 7 14 718
90 % 7 14 749
70 % 7 14 789
50 % 36 43 490
40 % 295 325 30
30 % 320 351 43
Entity #3 | Chains: C,F,I,L,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 553
95 % 8 15 700
90 % 8 15 732
70 % 16 24 503
50 % 16 24 586
40 % 296 325 30
30 % 321 351 43
Entity #4 | Chains: 0,1,2,3,4,5,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 122 20
95 % 166 173 13
90 % 171 178 14
70 % 174 181 23
50 % 176 183 33
40 % 195 202 32
30 % 215 222 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.