Sequence Similarity Clusters for the Entities in PDB 1O1C

Entity #1 | Chains: A,D,G,J,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 616
95 % 8 15 801
90 % 8 15 831
70 % 12 19 769
50 % 43 50 457
40 % 91 101 296
30 % 123 133 220
Entity #2 | Chains: B,E,H,K,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 673
95 % 7 14 842
90 % 7 14 876
70 % 9 16 860
50 % 39 47 528
40 % 318 349 43
30 % 345 376 51
Entity #3 | Chains: C,F,I,L,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 663
95 % 8 15 831
90 % 8 15 865
70 % 17 25 629
50 % 17 25 677
40 % 319 349 43
30 % 346 376 51
Entity #4 | Chains: 0,1,2,3,4,5,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 130 137 8
95 % 190 197 9
90 % 195 202 10
70 % 200 207 13
50 % 207 214 15
40 % 226 233 23
30 % 246 253 38

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures