Sequence Similarity Clusters for the Entities in PDB 1O1A

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 595
95 % 7 15 772
90 % 7 15 799
70 % 11 19 747
50 % 42 50 444
40 % 90 101 281
30 % 115 126 237
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 642
95 % 6 14 805
90 % 6 14 839
70 % 8 16 835
50 % 38 47 507
40 % 303 336 36
30 % 330 363 47
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 631
95 % 7 15 798
90 % 7 15 829
70 % 16 25 609
50 % 16 25 652
40 % 304 336 36
30 % 331 363 47
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 123 22
95 % 171 179 15
90 % 176 184 15
70 % 180 188 23
50 % 183 191 37
40 % 202 210 39
30 % 222 230 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.