Sequence Similarity Clusters for the Entities in PDB 1O1A

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 507
95 % 7 15 671
90 % 7 15 700
70 % 8 16 714
50 % 39 47 408
40 % 89 100 261
30 % 114 125 216
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 567
95 % 6 14 716
90 % 6 14 746
70 % 6 14 787
50 % 35 43 490
40 % 293 325 30
30 % 318 351 43
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 551
95 % 7 15 699
90 % 7 15 730
70 % 15 24 503
50 % 15 24 586
40 % 294 325 30
30 % 319 351 43
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 114 122 20
95 % 165 173 13
90 % 170 178 14
70 % 173 181 23
50 % 175 183 33
40 % 194 202 32
30 % 214 222 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.