Sequence Similarity Clusters for the Entities in PDB 1O1A

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 586
95 % 7 15 764
90 % 7 15 790
70 % 9 17 789
50 % 40 48 444
40 % 88 99 281
30 % 113 124 234
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 633
95 % 6 14 796
90 % 6 14 828
70 % 8 16 831
50 % 38 47 500
40 % 303 336 33
30 % 330 363 47
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 622
95 % 7 15 787
90 % 7 15 816
70 % 16 25 596
50 % 16 25 635
40 % 304 336 33
30 % 331 363 47
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 115 123 22
95 % 168 176 15
90 % 173 181 16
70 % 177 185 24
50 % 179 187 38
40 % 198 206 46
30 % 218 226 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.