Sequence Similarity Clusters for the Entities in PDB 1O19

Entity #1 | Chains: A,D,G,J,M,S
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 525
95 % 10 15 689
90 % 10 15 718
70 % 12 17 722
50 % 43 48 418
40 % 93 101 262
30 % 118 126 218
Entity #2 | Chains: B,E,H,K,N,T
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 578
95 % 9 14 735
90 % 9 14 767
70 % 10 15 790
50 % 39 44 494
40 % 301 327 31
30 % 327 354 43
Entity #3 | Chains: C,F,I,L,O,U
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 567
95 % 10 15 715
90 % 10 15 746
70 % 19 25 529
50 % 19 25 591
40 % 302 327 31
30 % 328 354 43
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 123 20
95 % 169 174 13
90 % 174 179 14
70 % 177 182 23
50 % 179 184 36
40 % 198 203 35
30 % 218 223 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.