Sequence Similarity Clusters for the Entities in PDB 1O19

Entity #1 | Chains: A,D,G,J,M,S
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 596
95 % 10 15 773
90 % 10 15 800
70 % 14 19 754
50 % 45 50 446
40 % 93 101 284
30 % 118 126 238
Entity #2 | Chains: B,E,H,K,N,T
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 645
95 % 9 14 806
90 % 9 14 841
70 % 11 16 837
50 % 41 47 507
40 % 312 339 39
30 % 339 366 49
Entity #3 | Chains: C,F,I,L,O,U
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 633
95 % 10 15 799
90 % 10 15 831
70 % 19 25 610
50 % 19 25 653
40 % 313 339 39
30 % 340 366 49
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 123 23
95 % 174 179 15
90 % 179 184 15
70 % 184 189 23
50 % 187 192 36
40 % 206 211 41
30 % 226 231 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.