Sequence Similarity Clusters for the Entities in PDB 1O19

Entity #1 | Chains: A,D,G,J,M,S
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 576
95 % 10 15 753
90 % 10 15 779
70 % 12 17 770
50 % 43 48 441
40 % 91 99 280
30 % 116 124 231
Entity #2 | Chains: B,E,H,K,N,T
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 623
95 % 9 14 790
90 % 9 14 819
70 % 11 16 821
50 % 41 47 494
40 % 308 335 32
30 % 335 362 47
Entity #3 | Chains: C,F,I,L,O,U
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 611
95 % 10 15 779
90 % 10 15 805
70 % 19 25 585
50 % 19 25 627
40 % 309 335 32
30 % 336 362 47
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 123 22
95 % 169 174 15
90 % 174 179 16
70 % 177 182 25
50 % 179 184 38
40 % 198 203 47
30 % 218 223 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.