Sequence Similarity Clusters for the Entities in PDB 1O19

Entity #1 | Chains: A,D,G,J,M,S
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 561
95 % 10 15 736
90 % 10 15 765
70 % 12 17 746
50 % 43 48 432
40 % 93 101 268
30 % 118 126 226
Entity #2 | Chains: B,E,H,K,N,T
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 11 608
95 % 9 14 776
90 % 9 14 806
70 % 10 15 832
50 % 39 44 508
40 % 303 329 31
30 % 329 356 44
Entity #3 | Chains: C,F,I,L,O,U
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 12 597
95 % 10 15 765
90 % 10 15 793
70 % 19 25 560
50 % 19 25 605
40 % 304 329 31
30 % 330 356 44
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 123 20
95 % 169 174 13
90 % 174 179 14
70 % 177 182 23
50 % 179 184 36
40 % 198 203 37
30 % 218 223 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.