Sequence Similarity Clusters for the Entities in PDB 1O18

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 598
95 % 13 15 777
90 % 13 15 805
70 % 17 19 761
50 % 48 50 450
40 % 96 101 288
30 % 121 126 239
Entity #2 | Chains: E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 650
95 % 12 14 810
90 % 12 14 846
70 % 14 16 842
50 % 44 47 511
40 % 319 340 39
30 % 346 367 51
Entity #3 | Chains: F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 637
95 % 13 15 803
90 % 13 15 836
70 % 22 25 617
50 % 22 25 662
40 % 320 340 39
30 % 347 367 51
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 121 123 23
95 % 177 179 15
90 % 182 184 16
70 % 187 189 23
50 % 190 192 36
40 % 209 211 41
30 % 229 231 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.