Sequence Similarity Clusters for the Entities in PDB 1O18

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 595
95 % 13 15 772
90 % 13 15 799
70 % 17 19 747
50 % 48 50 444
40 % 96 101 281
30 % 121 126 237
Entity #2 | Chains: E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 642
95 % 12 14 805
90 % 12 14 839
70 % 14 16 835
50 % 44 47 507
40 % 315 336 36
30 % 342 363 47
Entity #3 | Chains: F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 631
95 % 13 15 798
90 % 13 15 829
70 % 22 25 609
50 % 22 25 652
40 % 316 336 36
30 % 343 363 47
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 121 123 22
95 % 177 179 15
90 % 182 184 15
70 % 186 188 23
50 % 189 191 37
40 % 208 210 39
30 % 228 230 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.