Sequence Similarity Clusters for the Entities in PDB 1O0P

Entity #1 | Chains: A
Splicing factor U2AF 65 kDa subunit protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 7828
95 % 7 7 7887
90 % 7 7 7488
70 % 7 7 7277
50 % 7 7 6990
40 % 7 7 6226
30 % 230 240 197
Entity #2 | Chains: B
Splicing Factor SF1 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3V4M 1 A, B Splicing factor U2AF 65 kDa subunit RNA binding domain 10090
2 4Z2X 1 A, B Splicing factor U2AF 65 kDa subunit RNA binding domain (UNP residues 371-475) 10090
3 4FXW 1 A, C Splicing factor U2AF 65 kDa subunit 9606
4 2M52 1 A Splicing factor U2AF 65 kDa subunit UNP residues 371-475 10090
5 2M0G 2 B Splicing factor U2AF 65 kDa subunit RRM 3 domain residues 372-475 9606
6 1OPI 1 A SPLICING FACTOR U2AF 65 KDA SUBUNIT C-TERMINAL RRM DOMAIN 9606
7 1O0P 1 A Splicing factor U2AF 65 kDa subunit C-terminal RRM domain 9606