Sequence Similarity Clusters for the Entities in PDB 1O0D

Entity #1 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 286 335 45
95 % 287 336 60
90 % 287 336 65
70 % 288 338 76
50 % 288 338 101
40 % 288 338 125
30 % 288 338 137
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 248 290 55
95 % 319 374 35
90 % 323 381 38
70 % 335 405 43
50 % 335 405 78
40 % 1441 1683 4
30 % 1557 1832 6
Entity #3 | Chains: D
Decapeptide Hirudin Analogue protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.