Sequence Similarity Clusters for the Entities in PDB 1O0D

Entity #1 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 280 329 44
95 % 281 330 60
90 % 281 330 65
70 % 282 332 76
50 % 282 332 101
40 % 282 332 125
30 % 282 332 136
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 242 284 55
95 % 313 368 37
90 % 317 375 38
70 % 329 399 44
50 % 329 399 78
40 % 1385 1623 4
30 % 1499 1765 6
Entity #3 | Chains: D
Decapeptide Hirudin Analogue protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.