Sequence Similarity Clusters for the Entities in PDB 1O0C

Entity #1 | Chains: B
Glutaminyl tRNA rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Glutaminyl-tRNA synthetase protein, length: 554 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 3824
95 % 11 19 3268 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 11 19 3314
70 % 11 19 3275
50 % 12 21 2747
40 % 12 21 2701
30 % 12 21 2534

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures