Sequence Similarity Clusters for the Entities in PDB 1O0A

Entity #1 | Chains: A
Bacteriorhodopsin protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 36 986
95 % 10 120 263 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 10 121 273
70 % 10 121 309
50 % 10 136 273
40 % 10 136 303
30 % 13 194 193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures