Sequence Similarity Clusters for the Entities in PDB 1O0A

Entity #1 | Chains: A
Bacteriorhodopsin protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 75 344
95 % 10 118 242 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 10 119 253
70 % 10 119 284
50 % 10 134 258
40 % 10 134 273
30 % 13 192 170

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.