Sequence Similarity Clusters for the Entities in PDB 1NZQ

Entity #1 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 328 42
95 % 234 329 57
90 % 234 329 62
70 % 234 331 71
50 % 234 331 95
40 % 234 331 120
30 % 234 331 132
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 283 51
95 % 261 367 33
90 % 264 374 35
70 % 269 398 40
50 % 269 398 70
40 % 1188 1605 4
30 % 1284 1747 6
Entity #3 | Chains: D
Decapeptide Hirudin Analogue protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.