Sequence Similarity Clusters for the Entities in PDB 1NZQ

Entity #1 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 237 331 44
95 % 237 332 60
90 % 237 332 65
70 % 237 334 77
50 % 237 334 101
40 % 237 334 125
30 % 237 334 137
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 212 286 55
95 % 264 370 36
90 % 267 377 38
70 % 272 401 44
50 % 272 401 78
40 % 1212 1635 4
30 % 1308 1777 6
Entity #3 | Chains: D
Decapeptide Hirudin Analogue protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.