Sequence Similarity Clusters for the Entities in PDB 1NZQ

Entity #1 | Chains: L
Thrombin light chain protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 243 338 45
95 % 243 339 62
90 % 243 339 66
70 % 243 341 78
50 % 243 341 107
40 % 243 341 130
30 % 243 341 137
Entity #2 | Chains: H
Thrombin heavy chain protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 290 58
95 % 270 377 35
90 % 273 384 39
70 % 278 408 46
50 % 278 408 84
40 % 1281 1719 4
30 % 1377 1869 6
Entity #3 | Chains: D
Decapeptide Hirudin Analogue protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures