Sequence Similarity Clusters for the Entities in PDB 1NYW

Entity #1 | Chains: A,B
dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 5175
95 % 3 4 5877 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 3 4 5882
70 % 3 4 5748
50 % 3 4 5406
40 % 3 4 5081
30 % 4 15 1371

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.