Sequence Similarity Clusters for the Entities in PDB 1NYS

Entity #1 | Chains: A,C
activin receptor protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 9395
95 % 4 5 9464 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 5 9354
70 % 4 5 8899
50 % 6 8 4716
40 % 6 8 4478
30 % 6 8 4093
Entity #2 | Chains: B,D
Inhibin beta A chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 2216
95 % 6 9 2858 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.1
PDBFlex
90 % 6 9 2904
70 % 6 9 2880
50 % 6 9 2839
40 % 44 49 543
30 % 55 66 391

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.