Sequence Similarity Clusters for the Entities in PDB 1NYQ

Entity #1 | Chains: A,B
threonyl-tRNA synthetase 1 protein, length: 645 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16475
95 % 2 2 15322 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.8
PDBFlex
90 % 2 2 15035
70 % 2 2 14116
50 % 2 2 12525
40 % 3 3 10162
30 % 3 3 8866

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.