Sequence Similarity Clusters for the Entities in PDB 1NYJ

Entity #1 | Chains: A,B,C,D
Matrix protein M2 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 2728
95 % 13 14 1687
90 % 13 14 1727
70 % 13 14 1747
50 % 13 14 1786
40 % 13 14 1767
30 % 13 14 1717

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures