Sequence Similarity Clusters for the Entities in PDB 1NYJ

Entity #1 | Chains: A,B,C,D
Matrix protein M2 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 2816
95 % 13 14 1764
90 % 13 14 1808
70 % 13 14 1817
50 % 13 14 1853
40 % 13 14 1835
30 % 13 14 1779

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures