Sequence Similarity Clusters for the Entities in PDB 1NYB

Entity #1 | Chains: B
BoxB RNA rna, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Probable regulatory protein N protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73399
95 % 1 1 51254
90 % 1 1 48660
70 % 1 1 42756
50 % 1 1 36601
40 % 1 1 32333
30 % 1 1 27479

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.