Sequence Similarity Clusters for the Entities in PDB 1NY7

Entity #1 | Chains: 1
COWPEA MOSAIC VIRUS, SMALL (S) SUBUNIT protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25013
95 % 1 3 20838
90 % 1 3 20172
70 % 1 3 18522
50 % 1 3 16131
40 % 1 3 14412
30 % 1 3 12327
Entity #2 | Chains: 2
COWPEA MOSAIC VIRUS, LARGE (L) SUBUNIT protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 13040
95 % 1 5 12421
90 % 1 5 12228
70 % 1 5 11521
50 % 3 8 6698
40 % 3 8 6240
30 % 3 8 5558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.