Sequence Similarity Clusters for the Entities in PDB 1NY5

Entity #1 | Chains: A,B
transcriptional regulator (NtrC family) protein, length: 387 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30866
95 % 1 1 26821 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 1 25855
70 % 1 1 23394
50 % 1 2 15601
40 % 2 3 10541
30 % 2 3 8992

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures