Sequence Similarity Clusters for the Entities in PDB 1NY5

Entity #1 | Chains: A,B
transcriptional regulator (NtrC family) protein, length: 387 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34113
95 % 1 1 27307 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 1 1 26367
70 % 1 1 23874
50 % 1 2 13268
40 % 2 3 10420
30 % 2 3 9087

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures