Sequence Similarity Clusters for the Entities in PDB 1NY3

Entity #1 | Chains: A
MAP kinase-activated protein kinase 2 protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7932
95 % 3 4 8005 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.4
PDBFlex
90 % 3 4 7936
70 % 3 4 7687
50 % 3 4 7058
40 % 3 4 6521
30 % 3 4 5706

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures