Sequence Similarity Clusters for the Entities in PDB 1NY1

Entity #1 | Chains: A,B
Probable polysaccharide deacetylase pdaA protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 8769
95 % 1 4 9062 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 4 8974
70 % 1 4 8618
50 % 2 5 6870
40 % 2 5 6383
30 % 3 7 4867

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.