Sequence Similarity Clusters for the Entities in PDB 1NXX

Entity #1 | Chains: A
DNA-binding response regulator protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 6396
95 % 6 11 6544 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 6 11 6533
70 % 6 11 6340
50 % 10 20 2054
40 % 18 47 685
30 % 88 262 123

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures