Sequence Similarity Clusters for the Entities in PDB 1NXX

Entity #1 | Chains: A
DNA-binding response regulator protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 5924
95 % 6 11 6578 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 6 11 6563
70 % 6 11 6403
50 % 10 20 2026
40 % 17 46 687
30 % 84 258 115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures