Sequence Similarity Clusters for the Entities in PDB 1NXT

Entity #1 | Chains: A
DNA-binding response regulator protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5864
95 % 10 11 6521 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 10 11 6503
70 % 10 11 6347
50 % 18 20 2007
40 % 34 44 735
30 % 182 256 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures