Sequence Similarity Clusters for the Entities in PDB 1NXT

Entity #1 | Chains: A
DNA-binding response regulator protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 6357
95 % 10 11 6508 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 10 11 6499
70 % 10 11 6302
50 % 18 20 2037
40 % 35 47 683
30 % 187 262 124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures