Sequence Similarity Clusters for the Entities in PDB 1NXO

Entity #1 | Chains: A
DNA-binding response regulator protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 11 6441
95 % 4 11 6578 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 4 11 6564
70 % 4 11 6371
50 % 7 20 2071
40 % 13 47 692
30 % 61 262 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2A9O 1 A Response regulator Receiver Domain (residues 1-120) 1313
2 2A9P 1 A Response regulator N-terminal Domain (RESIDUES 1-120) 1313
3 1NXP 1 A DNA-binding response regulator MicA receiver domain 1313
4 1NXO 1 A DNA-binding response regulator MicA receiver domain 1313
5 1NXW 1 A DNA-binding response regulator MicA Receiver Domain 1313
6 1NXX 1 A DNA-binding response regulator MICA receiver domain 1313
7 1NXS 1 A DNA-binding response regulator MicA Receiver Domain 1313
8 1NXV 1 A DNA-binding response regulator MicA Receiver Domain 1313
9 2A9R 1 A DNA-binding response regulator N-terminal domain, residues 1-120 1313
10 1NXT 1 A DNA-binding response regulator MicA receiver Domain 1313
11 2A9Q 1 A Response regulator N-terminal Domain (residues 1-120) 1313