Sequence Similarity Clusters for the Entities in PDB 1NXM

Entity #1 | Chains: A,B
dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 5257
95 % 1 4 5957 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 4 5963
70 % 1 4 5822
50 % 1 4 5473
40 % 1 4 5142
30 % 1 15 1386

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures