Sequence Similarity Clusters for the Entities in PDB 1NXM

Entity #1 | Chains: A,B
dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 6097
95 % 1 4 6271 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 4 6264
70 % 1 4 6109
50 % 1 4 5713
40 % 1 4 5331
30 % 1 19 1169

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures