Sequence Similarity Clusters for the Entities in PDB 1NXK

Entity #1 | Chains: A,B,C,D
MAP kinase-activated protein kinase 2 protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 7255
95 % 1 4 7836 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.4
PDBFlex
90 % 1 4 7781
70 % 1 4 7564
50 % 1 4 6969
40 % 1 4 6486
30 % 1 4 5807

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures