Sequence Similarity Clusters for the Entities in PDB 1NXK

Entity #1 | Chains: A,B,C,D
MAP kinase-activated protein kinase 2 protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 6923
95 % 1 4 7497 Flexibility: Medium
Max RMSD: 5.5, Avg RMSD: 3.4
PDBFlex
90 % 1 4 7452
70 % 1 4 7266
50 % 1 4 6686
40 % 1 4 6228
30 % 1 4 5572

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.