Sequence Similarity Clusters for the Entities in PDB 1NXJ

Entity #1 | Chains: A,B,C
Probable S-adenosylmethionine:2-demethylmenaquinone methyltransferase protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28370
95 % 1 1 23605 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 22817
70 % 1 1 20813
50 % 1 1 18013
40 % 1 1 16057
30 % 1 1 13727

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures