Sequence Similarity Clusters for the Entities in PDB 1NXD

Entity #1 | Chains: 1,2,3,4
concanavalin A protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 58 184
95 % 18 85 142 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 18 90 147
70 % 24 113 137
50 % 24 113 167
40 % 24 113 182
30 % 24 113 200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.