Sequence Similarity Clusters for the Entities in PDB 1NXC

Entity #1 | Chains: A
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26416
95 % 1 2 22364 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 21708
70 % 1 2 19912
50 % 1 2 17275
40 % 1 7 6470
30 % 1 15 2312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures