Sequence Similarity Clusters for the Entities in PDB 1NXC

Entity #1 | Chains: A
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26025
95 % 1 2 22046 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 2 21408
70 % 1 2 19652
50 % 1 2 17064
40 % 1 7 6374
30 % 1 15 2279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures