Sequence Similarity Clusters for the Entities in PDB 1NX1

Entity #1 | Chains: A,B
Calcium-dependent protease, small subunit protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 5459
95 % 8 15 2372 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 8 21 1727
70 % 8 21 1745
50 % 8 22 1592
40 % 8 22 1601
30 % 16 46 597
Entity #2 | Chains: C,D
Calpastatin protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures