Sequence Similarity Clusters for the Entities in PDB 1NX0

Entity #1 | Chains: A,B
Calcium-dependent protease, small subunit protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 5095
95 % 12 15 2219 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.9
PDBFlex
90 % 13 21 1615
70 % 13 21 1629
50 % 13 22 1501
40 % 13 22 1521
30 % 26 45 589
Entity #2 | Chains: C,D
Calpastatin protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: E
Small molecule inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.